Code | Display | Definition |
C39-1 | CKIT | CKIT |
C39-2 | b-catenine | b-catenine |
C39-3 | CKIT/DOG1 | CKIT/DOG1 |
C39-4 | FOXL2/DICER | FOXL2/DICER |
C39-5 | ETV6-NTRK3 | ETV6-NTRK3 |
C39-6 | MYB-NFIB | MYB-NFIB |
C39-7 | PDGFRA/FGFR1 | PDGFRA/FGFR1 |
C39-8 | MDM2 | MDM2 |
C39-9 | N-MYC | N-MYC |
C39-10 | C-MYC | C-MYC |
C39-11 | BCR-ABL1 | BCR-ABL1 |
C39-12 | COL1A1 | COL1A1 |
C39-13 | DDIT3 | DDIT3 |
C39-14 | EWSR2 | EWSR2 |
C39-15 | SYT | SYT |
C39-16 | CTNNB1 | CTNNB1 |
C39-17 | FUS | FUS |
C39-18 | IGH-BCL2 | IGH-BCL2 |
C39-19 | JAZF1 | JAZF1 |
C39-20 | FOXO1A | FOXO1A |
C39-21 | TFE3 | TFE3 |
C39-22 | HPV | HPV |
C39-23 | Merkell | Merkell |
C39-24 | EBER | EBER |
C39-25 | PSA | PSA |
C39-26 | CA125 | CA125 |
C39-27 | CA153 | CA153 |
C39-28 | CA199 | CA199 |
C39-29 | Ki67 | Ki67 |
C39-30 | Nb mitoses | Nb mitoses |
C39-31 | RO | RO |
C39-32 | RP | RP |
C39-33 | HER2 | HER2 |
C39-34 | PD-L1 | PD-L1 |
C39-35 | AMHR2 | AMHR2 |
C39-36 | P53 | P53 |
C39-37 | BRCA | BRCA |
C39-38 | MSI | MSI |
C39-39 | CDK12 | CDK12 |
C39-40 | BRAF | BRAF |
C39-41 | NRAS-KRAS | NRAS-KRAS |
C39-42 | EGFR | EGFR |
C39-43 | ALK | ALK |
C39-44 | ROS1 | ROS1 |
C39-45 | C-MET | C-MET |
C39-46 | ESR1 | ESR1 |
C39-47 | PAM50 | PAM50 |
C39-48 | ENDOPREDICT | ENDOPREDICT |
C37-1 | Biology | Biology |
C37-2 | Imaging | Imaging |
C37-3 | Omic | Omic |
C37-4 | Pathology | Pathology |
C27-1 | 5th edition | UICC TNM Classification 5th edition |
C27-2 | 6th edition | UICC TNM Classification 6th edition |
C27-3 | 7th edition | UICC TNM Classification 7th edition |
O59-1 | Normal | Normal sample |
O59-2 | Tumoral | Tumoral sample |
C60-1 | Room temperature | Room temperature |
C60-2 | Between 2 °C and 10 °C | Between 2 °C and 10 °C |
C60-3 | Between -18 °C and -35 °C | Between -18 °C and -35 °C |
C60-4 | Between -60 °C and -85 °C | Between -60 °C and -85 °C |
C60-5 | Liquid nitrogen, -150 °C to -196 °C | Liquid nitrogen, -150 °C to -196 °C |
O6-1 | ChIP-on-Chip | ChIP-on-Chip |
O6-2 | ChIP-seq | ChIP-seq |
O6-3 | DNA microarray | DNA microarray |
O6-4 | DNA targeted panel sequencing | DNA targeted panel sequencing |
O6-5 | Exome sequencing | Exome sequencing |
O6-6 | Mass spectrometry | Mass spectrometry |
O6-7 | MeDIP-Chip | MeDIP-Chip |
O6-8 | MeDIP-seq | MeDIP-seq |
O6-9 | Methylation microarray | Methylation microarray |
O6-10 | RNA microarray | RNA microarray |
O6-11 | RNA targeted panel sequencing | RNA targeted panel sequencing |
O6-12 | RNA-seq | RNA-seq |
O6-13 | RPPA | RPPA |
O6-14 | Whole genome bisulfite sequencing | Whole genome bisulfite sequencing |
O6-15 | Whole genome sequencing | Whole genome sequencing |
O6-16 | miRNA microarray | miRNA microarray |
O90-1 | Fusion transcript | Fusion transcript |
O90-3 | Population frequency | Population frequency |
O90-4 | Protein reference | Protein reference |
O90-5 | Transcript reference | Transcript reference |
O90-6 | Variant id | Variant id |
O19-1 | MT | Mitochondrial genetic material |
O19-2 | viral | Viral genetic material |
O19-3 | bacterial | Bacterial genetic material |
O63-1 | SIFT | SIFT |
O63-2 | POLYPHEN2_HDIV | POLYPHEN2_HDIV |
O63-3 | MutationTaster | MutationTaster |
O81-1 | Pathogenic | Pathogenic |
O81-2 | Likely pathogenic | Likely pathogenic |
O81-3 | Uncertain significance | Uncertain significance |
O81-4 | Likely benign | Likely benign |
O81-5 | Benign | Benign |
O16-1 | Experimental | Experimental |
O16-2 | By biologist | By biologist |
O16-3 | In silico | In silico |
O84-1 | RawExpression | RawExpression |
O84-2 | NormalizedExpression | NormalizedExpression |
O84-3 | TPMExpression | TPMExpression |
O84-4 | RPKMExpression | RPKMExpression |
O28-1 | readthrough | readthrough |
C60-6 | Other | Other |
C77-6 | Other | Other |
O6-OTH | Other | Other |
O13-OTH | Other | Other |
O7-1 | Affymetrix Cytoscan HD | |
O7-2 | Affymetrix EMET Plus Premier Pack | |
O7-3 | Affymetrix Genome-Wide Human SNP Array 5.0 | |
O7-4 | Affymetrix Genome-Wide Human SNP Array 6.0 | |
O7-5 | Affymetrix HT Human Genome U133A Array Plate Set | |
O7-6 | Affymetrix Human Exon 1.0 ST | |
O7-7 | Affymetrix Human Gene 1.0 ST | |
O7-8 | Affymetrix Human Genome U219 Array Plate | |
O7-9 | Affymetrix Human MIP 330K | |
O7-10 | Affymetrix Human U133 Plus 2.0 | |
O7-11 | Affymetrix Human U133 Plus PM | |
O7-12 | Affymetrix Mapping 100K Array Set | |
O7-13 | Affymetrix Mapping 10K 2.0 Array Set | |
O7-14 | Affymetrix Mapping 500K Array Set | |
O7-15 | Affymetrix OncoScan FFPE Express 2.0 | |
O7-16 | Agilent 244K Custom Gene Expression G4502A-07 | |
O7-17 | Agilent 244K Custom Gene Expression G4502A-07-1 | |
O7-18 | Agilent 244K Custom Gene Expression G4502A-07-2 | |
O7-19 | Agilent 244K Custom Gene Expression G4502A-07-3 | |
O7-20 | Agilent 8 x 15K Human miRNA-specific microarray | |
O7-21 | Agilent Human CGH 1x1M | |
O7-22 | Agilent Human CGH 2x400K | |
O7-23 | Agilent Human CGH 4x180K | |
O7-24 | Agilent Human CGH 8x60K | |
O7-25 | Agilent Human CNV 2x400K | |
O7-26 | Agilent Human CNV Association 2x105K | |
O7-27 | Agilent Human CpG Island Microarray Kit | |
O7-28 | Agilent Human Genome 105A | |
O7-29 | Agilent Human Genome 244A | |
O7-30 | Agilent Human Genome 44K | |
O7-31 | Agilent Human Genome CGH Custom Microaary 2x415K | |
O7-32 | Agilent Human miRNA Microarray Kit (v2) | |
O7-33 | Agilent Human Promoter ChIP-on-chip Microarray Set | |
O7-34 | Agilent Human SpliceArray | |
O7-35 | Agilent Whole Human Genome Oligo Microarray Kit | |
O7-36 | Almac Human CRC | |
O7-37 | capillary sequencing | |
O7-38 | Complete Genomics | |
O7-39 | Custom-designed cDNA array | |
O7-40 | Custom-designed gene expression array | |
O7-41 | Helicos sequencing | |
O7-42 | HumanOmni2.5-8 BeadChip Kit | |
O7-43 | Illumina GA sequencing | |
O7-44 | Illumina goldengate methylation | |
O7-45 | Illumina GoldenGate Methylation Cancer Panel I | |
O7-46 | Illumina HiSeq | |
O7-47 | Illumina HiSeq X Ten | |
O7-48 | Illumina Human Omni1-Quad beadchip | |
O7-49 | Illumina Human1M OmniQuad chip | |
O7-50 | Illumina human1m-duo | |
O7-51 | Illumina human510s-duo | |
O7-52 | Illumina human660w-quad | |
O7-53 | Illumina HumanCNV370-Duo v1.0 BeadChip | |
O7-54 | Illumina humancytosnp-12 | |
O7-55 | Illumina HumanHap550 | |
O7-56 | Illumina HumanHT-12 v4.0 beadchip | |
O7-57 | Illumina humanht-16 | |
O7-58 | Illumina humanht-17 | |
O7-59 | Illumina humanmethylation27 | |
O7-60 | Illumina HumanOmniExpress BeadChip | |
O7-61 | Illumina HumanRef-8 v3.0 beadchip | |
O7-62 | Illumina HumanWG-6 v3.0 beadchip | |
O7-63 | Illumina Infinium HumanMethylation450 | |
O7-64 | Illumina microRNA Expression Profiling Panel | |
O7-65 | Illumina MiSeq Personal Sequencer | |
O7-66 | Ion Torrent PGM | |
O7-67 | Ion Torrent Proton | |
O7-68 | M.D. Anderson Reverse Phase Protein Array Core | |
O7-69 | Microsatellite Instability Analysis | |
O7-70 | nanoString | |
O7-71 | Nimblegen CGS | |
O7-72 | Nimblegen Gene Expression 12x135K | |
O7-73 | Nimblegen Gene Expression 385K | |
O7-74 | Nimblegen Gene Expression 4x72K | |
O7-75 | Nimblegen Human CGH 2.1M Whole-Genome v2.0D Array | |
O7-76 | Nimblegen Human CGH 3x720 Whole-Genome v3.0 Array | |
O7-77 | Nimblegen Human Methylation 2.1M Whole-Genome sets | |
O7-78 | Nimblegen Human Methylation 385K Whole-Genome sets | |
O7-79 | PacBio RS sequencing | |
O7-80 | PCR | |
O7-81 | PCR and capillary sequencing | |
O7-82 | qPCR | |
O7-83 | Roche 454 sequencing | |
O7-84 | Sequenom MassARRAY | |
O7-85 | SOLiD sequencing | |
O7-86 | Digital PCR | |
O7-87 | NextSeq 500 | |
O7-88 | NovaSeq | |
O7-OTH | Other | |
O10-1 | Ion AmpliSeq Cancer Hotspot Panel v2 | |
O10-2 | Ion AmpliSeq Colon and Lung Cancer Research Panel v2 | |
O10-3 | Ion AmpliSeq Comprehensive Cancer Panel | |
O10-4 | Ion AmpliSeq Oncomine Comprehensive Assay | |
O10-5 | Ion AmpliSeq Oncomine Focus Assay | |
O10-6 | Ion AmpliSeq TP53 Research Panel | |
O10-7 | Lyric: Ion AmpliSeq Profiler | |
O10-8 | QIAGEN GeneRead DNAseq Targeted Panels V2 | |
O10-9 | SAFIR02 Panel | |
O10-10 | Mosc3 | |
010-OTH | Other | |