FHIR Osiris Implementation Guide - Local Development build (v2.1.0) built by the FHIR (HL7® FHIR® Standard) Build Tools. See the Directory of published versions
: fhir-osiris-example-biologicalsample-1 - TTL Representation
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@prefix fhir: <http://hl7.org/fhir/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .
# - resource -------------------------------------------------------------------
a fhir:Specimen ;
fhir:nodeRole fhir:treeRoot ;
fhir:id [ fhir:v "fhir-osiris-example-biologicalsample-1"] ; #
fhir:meta [
( fhir:profile [
fhir:v "https://build.fhir.org/ig/arkhn/arkhn-ig-osiris/StructureDefinition/onco-biological-sample"^^xsd:anyURI ;
fhir:link <https://build.fhir.org/ig/arkhn/arkhn-ig-osiris/StructureDefinition/onco-biological-sample> ] )
] ; #
fhir:text [
fhir:status [ fhir:v "extensions" ] ;
fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p><b>Generated Narrative: Specimen</b><a name=\"fhir-osiris-example-biologicalsample-1\"> </a><a name=\"hcfhir-osiris-example-biologicalsample-1\"> </a></p><div style=\"display: inline-block; background-color: #d9e0e7; padding: 6px; margin: 4px; border: 1px solid #8da1b4; border-radius: 5px; line-height: 60%\"><p style=\"margin-bottom: 0px\">Resource Specimen "fhir-osiris-example-biologicalsample-1" </p><p style=\"margin-bottom: 0px\">Profile: <a href=\"StructureDefinition-onco-biological-sample.html\">Biological Sample</a></p></div><p><b>Biological Sample Origin</b>: Origin of the sample <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"CodeSystem-OsirisCS.html\">Osiris code system</a>#O59-2)</span></p><p><b>Based On Condition (Tumor Pathology Event)</b>: <a href=\"Condition-fhir-osiris-example-TumorPathologyEvent-instance-1.html\">Condition/fhir-osiris-example-TumorPathologyEvent-instance-1</a></p><p><b>identifier</b>: ech primary</p><p><b>type</b>: C4039816 <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.3.0/CodeSystem-umls.html\">Unified Medical Language System</a>#C4039816)</span></p><p><b>subject</b>: <a href=\"Patient-L304.html\">Patient/L304</a></p><h3>Collections</h3><table class=\"grid\"><tr><td style=\"display: none\">-</td><td><b>Collected[x]</b></td><td><b>Quantity</b></td><td><b>BodySite</b></td></tr><tr><td style=\"display: none\">*</td><td>2005-12-27</td><td>30 %<span style=\"background: LightGoldenRodYellow\"> (Details: [not stated] code C4055283 = 'C4055283')</span></td><td>C34 <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (<a href=\"http://terminology.hl7.org/5.3.0/CodeSystem-icd-o-3.html\">International Classification of Diseases for Oncology, version 3.</a>#C34)</span></td></tr></table><p><b>condition</b>: Storage temperature of the sample. <span style=\"background: LightGoldenRodYellow; margin: 4px; border: 1px solid khaki\"> (miabis#Tissue Frozen)</span></p></div>"
] ; #
fhir:extension ( [
fhir:url [ fhir:v "https://build.fhir.org/ig/arkhn/arkhn-ig-osiris/StructureDefinition/BiologicalSampleOrigin"^^xsd:anyURI ] ;
fhir:value [
a fhir:CodeableConcept ;
( fhir:coding [
fhir:system [ fhir:v "https://terminology.arkhn.com/osiris"^^xsd:anyURI ] ;
fhir:code [ fhir:v "O59-2" ] ] ) ;
fhir:text [ fhir:v "Origin of the sample" ] ]
] [
fhir:url [ fhir:v "https://build.fhir.org/ig/arkhn/arkhn-ig-osiris/StructureDefinition/BasedOnCondition"^^xsd:anyURI ] ;
fhir:value [
a fhir:Reference ;
fhir:reference [ fhir:v "Condition/fhir-osiris-example-TumorPathologyEvent-instance-1" ] ]
] ) ; #
fhir:identifier ( [
fhir:value [ fhir:v "ech primary" ]
] ) ; #
fhir:type [
( fhir:coding [
fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/umls"^^xsd:anyURI ] ;
fhir:code [ fhir:v "C4039816" ] ] )
] ; #
fhir:subject [
fhir:reference [ fhir:v "Patient/L304" ]
] ; #
fhir:collection [
fhir:collected [ fhir:v "2005-12-27"^^xsd:date ] ;
fhir:quantity [
fhir:value [ fhir:v "30"^^xsd:decimal ] ;
fhir:unit [ fhir:v "%" ] ;
fhir:code [ fhir:v "C4055283" ] ] ;
fhir:bodySite [
( fhir:coding [
fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/icd-o-3"^^xsd:anyURI ] ;
fhir:code [ fhir:v "C34" ] ] ) ]
] ; #
fhir:condition ( [
( fhir:coding [
fhir:system [ fhir:v "https://learning.iarc.fr/biobanking/all-resources/sample-and-data-management/miabis"^^xsd:anyURI ] ;
fhir:code [ fhir:v "Tissue Frozen" ] ] ) ;
fhir:text [ fhir:v "Storage temperature of the sample." ]
] ) . #
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