Chromosome Value Set - TTL Representation - FHIR Osiris Implementation Guide v2.1.0

FHIR Osiris Implementation Guide
2.1.0 - ci-build
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: Chromosome Value Set - TTL Representation

Draft as of 2024-03-21
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@prefix fhir: <http://hl7.org/fhir/> .
@prefix owl: <http://www.w3.org/2002/07/owl#> .
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> .
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> .

# - resource -------------------------------------------------------------------

 a fhir:ValueSet ;
  fhir:nodeRole fhir:treeRoot ;
  fhir:id [ fhir:v "Chromosome"] ; # 
  fhir:text [
fhir:status [ fhir:v "generated" ] ;
fhir:div "<div xmlns=\"http://www.w3.org/1999/xhtml\"><p>This value set includes codes based on the following rules:</p><ul><li>Include these codes as defined in <a href=\"http://loinc.org\"><code>http://loinc.org</code></a><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td><a href=\"https://loinc.org/LA21254-0/\">LA21254-0</a></td><td>chr1</td></tr><tr><td><a href=\"https://loinc.org/LA21255-7/\">LA21255-7</a></td><td>chr2</td></tr><tr><td><a href=\"https://loinc.org/LA21256-5/\">LA21256-5</a></td><td>chr3</td></tr><tr><td><a href=\"https://loinc.org/LA21257-3/\">LA21257-3</a></td><td>chr4</td></tr><tr><td><a href=\"https://loinc.org/LA21258-1/\">LA21258-1</a></td><td>chr5</td></tr><tr><td><a href=\"https://loinc.org/LA21259-9/\">LA21259-9</a></td><td>chr6</td></tr><tr><td><a href=\"https://loinc.org/LA21260-7/\">LA21260-7</a></td><td>chr7</td></tr><tr><td><a href=\"https://loinc.org/LA21261-5/\">LA21261-5</a></td><td>chr8</td></tr><tr><td><a href=\"https://loinc.org/LA21262-3/\">LA21262-3</a></td><td>chr9</td></tr><tr><td><a href=\"https://loinc.org/LA21263-1/\">LA21263-1</a></td><td>chr10</td></tr><tr><td><a href=\"https://loinc.org/LA21264-9/\">LA21264-9</a></td><td>chr11</td></tr><tr><td><a href=\"https://loinc.org/LA21265-6/\">LA21265-6</a></td><td>chr12</td></tr><tr><td><a href=\"https://loinc.org/LA21266-4/\">LA21266-4</a></td><td>chr13</td></tr><tr><td><a href=\"https://loinc.org/LA21267-2/\">LA21267-2</a></td><td>chr14</td></tr><tr><td><a href=\"https://loinc.org/LA21268-0/\">LA21268-0</a></td><td>chr15</td></tr><tr><td><a href=\"https://loinc.org/LA21269-8/\">LA21269-8</a></td><td>chr16</td></tr><tr><td><a href=\"https://loinc.org/LA21270-6/\">LA21270-6</a></td><td>chr17</td></tr><tr><td><a href=\"https://loinc.org/LA21271-4/\">LA21271-4</a></td><td>chr18</td></tr><tr><td><a href=\"https://loinc.org/LA21272-2/\">LA21272-2</a></td><td>chr19</td></tr><tr><td><a href=\"https://loinc.org/LA21273-0/\">LA21273-0</a></td><td>chr20</td></tr><tr><td><a href=\"https://loinc.org/LA21274-8/\">LA21274-8</a></td><td>chr21</td></tr><tr><td><a href=\"https://loinc.org/LA21275-5/\">LA21275-5</a></td><td>chr22</td></tr><tr><td><a href=\"https://loinc.org/LA21276-3/\">LA21276-3</a></td><td>chrX</td></tr><tr><td><a href=\"https://loinc.org/LA21277-1/\">LA21277-1</a></td><td>chrY</td></tr></table></li><li>Include these codes as defined in <code>https://github.com/siric-osiris/OSIRIS</code><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td>O19-1</td><td>MT</td></tr><tr><td>O19-2</td><td>viral</td></tr><tr><td>O19-3</td><td>bacterial</td></tr></table></li><li>Include these codes as defined in <a href=\"http://terminology.hl7.org/5.3.0/CodeSystem-umls.html\"><code>http://terminology.hl7.org/CodeSystem/umls</code></a><table class=\"none\"><tr><td style=\"white-space:nowrap\"><b>Code</b></td><td><b>Display</b></td></tr><tr><td>C0439673</td><td>Unknown</td></tr></table></li></ul></div>"
  ] ; # 
  fhir:url [ fhir:v "https://build.fhir.org/ig/arkhn/arkhn-ig-osiris/ValueSet/Chromosome"^^xsd:anyURI] ; # 
  fhir:version [ fhir:v "2.1.0"] ; # 
  fhir:name [ fhir:v "Chromosome"] ; # 
  fhir:title [ fhir:v "Chromosome Value Set"] ; # 
  fhir:status [ fhir:v "draft"] ; # 
  fhir:date [ fhir:v "2024-03-21T14:34:32+00:00"^^xsd:dateTime] ; # 
  fhir:publisher [ fhir:v "Arkhn"] ; # 
  fhir:contact ( [
fhir:name [ fhir:v "Arkhn" ] ;
    ( fhir:telecom [
fhir:system [ fhir:v "url" ] ;
fhir:value [ fhir:v "http://arkhn.com" ]     ] [
fhir:system [ fhir:v "email" ] ;
fhir:value [ fhir:v "contact@arkhn.com" ]     ] )
  ] [
fhir:name [ fhir:v "Nicolas Riss" ] ;
    ( fhir:telecom [
fhir:system [ fhir:v "email" ] ;
fhir:value [ fhir:v "nicolas@arkhn.com" ]     ] )
  ] ) ; # 
  fhir:description [ fhir:v "Chromosome"] ; # 
  fhir:compose [
    ( fhir:include [
fhir:system [ fhir:v "http://loinc.org"^^xsd:anyURI ] ;
      ( fhir:concept [
fhir:code [ fhir:v "LA21254-0" ] ;
fhir:display [ fhir:v "chr1" ]       ] [
fhir:code [ fhir:v "LA21255-7" ] ;
fhir:display [ fhir:v "chr2" ]       ] [
fhir:code [ fhir:v "LA21256-5" ] ;
fhir:display [ fhir:v "chr3" ]       ] [
fhir:code [ fhir:v "LA21257-3" ] ;
fhir:display [ fhir:v "chr4" ]       ] [
fhir:code [ fhir:v "LA21258-1" ] ;
fhir:display [ fhir:v "chr5" ]       ] [
fhir:code [ fhir:v "LA21259-9" ] ;
fhir:display [ fhir:v "chr6" ]       ] [
fhir:code [ fhir:v "LA21260-7" ] ;
fhir:display [ fhir:v "chr7" ]       ] [
fhir:code [ fhir:v "LA21261-5" ] ;
fhir:display [ fhir:v "chr8" ]       ] [
fhir:code [ fhir:v "LA21262-3" ] ;
fhir:display [ fhir:v "chr9" ]       ] [
fhir:code [ fhir:v "LA21263-1" ] ;
fhir:display [ fhir:v "chr10" ]       ] [
fhir:code [ fhir:v "LA21264-9" ] ;
fhir:display [ fhir:v "chr11" ]       ] [
fhir:code [ fhir:v "LA21265-6" ] ;
fhir:display [ fhir:v "chr12" ]       ] [
fhir:code [ fhir:v "LA21266-4" ] ;
fhir:display [ fhir:v "chr13" ]       ] [
fhir:code [ fhir:v "LA21267-2" ] ;
fhir:display [ fhir:v "chr14" ]       ] [
fhir:code [ fhir:v "LA21268-0" ] ;
fhir:display [ fhir:v "chr15" ]       ] [
fhir:code [ fhir:v "LA21269-8" ] ;
fhir:display [ fhir:v "chr16" ]       ] [
fhir:code [ fhir:v "LA21270-6" ] ;
fhir:display [ fhir:v "chr17" ]       ] [
fhir:code [ fhir:v "LA21271-4" ] ;
fhir:display [ fhir:v "chr18" ]       ] [
fhir:code [ fhir:v "LA21272-2" ] ;
fhir:display [ fhir:v "chr19" ]       ] [
fhir:code [ fhir:v "LA21273-0" ] ;
fhir:display [ fhir:v "chr20" ]       ] [
fhir:code [ fhir:v "LA21274-8" ] ;
fhir:display [ fhir:v "chr21" ]       ] [
fhir:code [ fhir:v "LA21275-5" ] ;
fhir:display [ fhir:v "chr22" ]       ] [
fhir:code [ fhir:v "LA21276-3" ] ;
fhir:display [ fhir:v "chrX" ]       ] [
fhir:code [ fhir:v "LA21277-1" ] ;
fhir:display [ fhir:v "chrY" ]       ] )     ] [
fhir:system [ fhir:v "https://github.com/siric-osiris/OSIRIS"^^xsd:anyURI ] ;
      ( fhir:concept [
fhir:code [ fhir:v "O19-1" ] ;
fhir:display [ fhir:v "MT" ]       ] [
fhir:code [ fhir:v "O19-2" ] ;
fhir:display [ fhir:v "viral" ]       ] [
fhir:code [ fhir:v "O19-3" ] ;
fhir:display [ fhir:v "bacterial" ]       ] )     ] [
fhir:system [ fhir:v "http://terminology.hl7.org/CodeSystem/umls"^^xsd:anyURI ] ;
      ( fhir:concept [
fhir:code [ fhir:v "C0439673" ] ;
fhir:display [ fhir:v "Unknown" ]       ] )     ] )
  ] . #